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Cluster: HRGMv2_2277_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2277_2 HRGMv2_2277_2_369 403247 404563 + GH18
pfam HRGMv2_2277_2 HRGMv2_2277_2_370 404641 405405 - DUF5714
pfam HRGMv2_2277_2 HRGMv2_2277_2_371 405628 407268 - ILVD_EDD_N | ILV_EDD_C
TC HRGMv2_2277_2 HRGMv2_2277_2_372 407252 408619 - 4.A.5.1.2
TC HRGMv2_2277_2 HRGMv2_2277_2_373 408686 408964 - 4.A.5.1.1
TC HRGMv2_2277_2 HRGMv2_2277_2_374 408993 409466 - 4.A.5.1.1
pfam HRGMv2_2277_2 HRGMv2_2277_2_375 409463 410101 - Aldolase
TC HRGMv2_2277_2 HRGMv2_2277_2_376 410148 413090 - 3.A.23.1.1
Gene ID: HRGMv2_2277_2_369
Type: CAZyme
Location: 403247 - 404563 (+)
Gene ID: HRGMv2_2277_2_370
Type: pfam
Location: 404641 - 405405 (-)
Gene ID: HRGMv2_2277_2_371
Type: pfam
Location: 405628 - 407268 (-)
Gene ID: HRGMv2_2277_2_372
Type: TC
Location: 407252 - 408619 (-)
Gene ID: HRGMv2_2277_2_373
Type: TC
Location: 408686 - 408964 (-)
Gene ID: HRGMv2_2277_2_374
Type: TC
Location: 408993 - 409466 (-)
Gene ID: HRGMv2_2277_2_375
Type: pfam
Location: 409463 - 410101 (-)
Gene ID: HRGMv2_2277_2_376
Type: TC
Location: 410148 - 413090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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