Cluster: HRGMv2_2276_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2276
- CGC Family ID: CGCFAM_05852
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2276_2 | HRGMv2_2276_2_125 | 136747 | 138075 | - | 2.A.66.1.37 |
| TF | HRGMv2_2276_2 | HRGMv2_2276_2_126 | 138190 | 139017 | + | MerR |
| TF | HRGMv2_2276_2 | HRGMv2_2276_2_127 | 139046 | 139897 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2276_2 | HRGMv2_2276_2_128 | 140103 | 142283 | + | GH36 |
| CAZyme | HRGMv2_2276_2 | HRGMv2_2276_2_129 | 142295 | 144163 | + | GH13_4 |
Gene ID: HRGMv2_2276_2_125
Type: TC
Location: 136747 - 138075 (-)
Type: TC
Location: 136747 - 138075 (-)
Gene ID: HRGMv2_2276_2_126
Type: TF
Location: 138190 - 139017 (+)
Type: TF
Location: 138190 - 139017 (+)
Gene ID: HRGMv2_2276_2_127
Type: TF
Location: 139046 - 139897 (-)
Type: TF
Location: 139046 - 139897 (-)
Gene ID: HRGMv2_2276_2_128
Type: CAZyme
Location: 140103 - 142283 (+)
Type: CAZyme
Location: 140103 - 142283 (+)
Gene ID: HRGMv2_2276_2_129
Type: CAZyme
Location: 142295 - 144163 (+)
Type: CAZyme
Location: 142295 - 144163 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.