Cluster: HRGMv2_2276_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2276_2 | HRGMv2_2276_2_79 | 81436 | 82116 | + | 9.B.143.2.3 |
| peptidase | HRGMv2_2276_2 | HRGMv2_2276_2_80 | 82168 | 83778 | - | C26.964 |
| pfam | HRGMv2_2276_2 | HRGMv2_2276_2_81 | 83880 | 85373 | - | DUF1846 | DUF1846_C |
| TC | HRGMv2_2276_2 | HRGMv2_2276_2_82 | 85541 | 87532 | + | 3.A.16.1.2 |
| TF | HRGMv2_2276_2 | HRGMv2_2276_2_83 | 87600 | 88619 | - | LacI |
| CAZyme | HRGMv2_2276_2 | HRGMv2_2276_2_84 | 88806 | 90482 | + | GH13_31 |
Gene ID: HRGMv2_2276_2_79
Type: TC
Location: 81436 - 82116 (+)
Type: TC
Location: 81436 - 82116 (+)
Gene ID: HRGMv2_2276_2_80
Type: peptidase
Location: 82168 - 83778 (-)
Type: peptidase
Location: 82168 - 83778 (-)
Gene ID: HRGMv2_2276_2_81
Type: pfam
Location: 83880 - 85373 (-)
Type: pfam
Location: 83880 - 85373 (-)
Gene ID: HRGMv2_2276_2_82
Type: TC
Location: 85541 - 87532 (+)
Type: TC
Location: 85541 - 87532 (+)
Gene ID: HRGMv2_2276_2_83
Type: TF
Location: 87600 - 88619 (-)
Type: TF
Location: 87600 - 88619 (-)
Gene ID: HRGMv2_2276_2_84
Type: CAZyme
Location: 88806 - 90482 (+)
Type: CAZyme
Location: 88806 - 90482 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.