Cluster: HRGMv2_2276_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2276_1 | HRGMv2_2276_1_743 | 789485 | 790633 | - | GH109 |
| pfam | HRGMv2_2276_1 | HRGMv2_2276_1_744 | 790650 | 791834 | - | ADH_zinc_N | ADH_N |
| pfam | HRGMv2_2276_1 | HRGMv2_2276_1_745 | 791868 | 793043 | - | ADH_zinc_N | ADH_N |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_746 | 793085 | 794614 | - | 3.A.1.2.19 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_747 | 794626 | 795582 | - | 3.A.1.2.19 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_748 | 795667 | 796692 | - | 3.A.1.2.19 |
Gene ID: HRGMv2_2276_1_743
Type: CAZyme
Location: 789485 - 790633 (-)
Type: CAZyme
Location: 789485 - 790633 (-)
Gene ID: HRGMv2_2276_1_744
Type: pfam
Location: 790650 - 791834 (-)
Type: pfam
Location: 790650 - 791834 (-)
Gene ID: HRGMv2_2276_1_745
Type: pfam
Location: 791868 - 793043 (-)
Type: pfam
Location: 791868 - 793043 (-)
Gene ID: HRGMv2_2276_1_746
Type: TC
Location: 793085 - 794614 (-)
Type: TC
Location: 793085 - 794614 (-)
Gene ID: HRGMv2_2276_1_747
Type: TC
Location: 794626 - 795582 (-)
Type: TC
Location: 794626 - 795582 (-)
Gene ID: HRGMv2_2276_1_748
Type: TC
Location: 795667 - 796692 (-)
Type: TC
Location: 795667 - 796692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.