Cluster: HRGMv2_2276_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_2276
- CGC Family ID: CGCFAM_00107
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2276_1 | HRGMv2_2276_1_732 | 777351 | 778502 | - | GH179 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_733 | 778536 | 779582 | - | 3.A.1.2.9 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_734 | 779637 | 780590 | - | 3.A.1.2.15 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_735 | 780583 | 781584 | - | 3.A.1.2.1 |
| TC | HRGMv2_2276_1 | HRGMv2_2276_1_736 | 781608 | 783134 | - | 3.A.1.2.20 |
Gene ID: HRGMv2_2276_1_732
Type: CAZyme
Location: 777351 - 778502 (-)
Type: CAZyme
Location: 777351 - 778502 (-)
Gene ID: HRGMv2_2276_1_733
Type: TC
Location: 778536 - 779582 (-)
Type: TC
Location: 778536 - 779582 (-)
Gene ID: HRGMv2_2276_1_734
Type: TC
Location: 779637 - 780590 (-)
Type: TC
Location: 779637 - 780590 (-)
Gene ID: HRGMv2_2276_1_735
Type: TC
Location: 780583 - 781584 (-)
Type: TC
Location: 780583 - 781584 (-)
Gene ID: HRGMv2_2276_1_736
Type: TC
Location: 781608 - 783134 (-)
Type: TC
Location: 781608 - 783134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.