dbCAN Logo

Cluster: HRGMv2_2276_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2276_8 HRGMv2_2276_8_6 7453 8913 - 2.A.66.12.2
CAZyme HRGMv2_2276_8 HRGMv2_2276_8_7 8923 10104 - GT4
pfam HRGMv2_2276_8 HRGMv2_2276_8_8 10111 11382 - Wzy_C
NULL(UNKNOWN) HRGMv2_2276_8 HRGMv2_2276_8_9 11391 12350 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2276_8 HRGMv2_2276_8_10 12398 13474 - GH177
pfam HRGMv2_2276_8 HRGMv2_2276_8_11 13504 14817 - UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_2276_8 HRGMv2_2276_8_12 14905 16023 - GT4
CAZyme HRGMv2_2276_8 HRGMv2_2276_8_13 16042 17286 - GT4
TC HRGMv2_2276_8 HRGMv2_2276_8_14 17305 17985 - 9.B.18.1.3
pfam HRGMv2_2276_8 HRGMv2_2276_8_15 18000 19202 - Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC HRGMv2_2276_8 HRGMv2_2276_8_16 19202 21145 - 9.B.18.2.1
Gene ID: HRGMv2_2276_8_6
Type: TC
Location: 7453 - 8913 (-)
Gene ID: HRGMv2_2276_8_7
Type: CAZyme
Location: 8923 - 10104 (-)
Gene ID: HRGMv2_2276_8_8
Type: pfam
Location: 10111 - 11382 (-)
Gene ID: HRGMv2_2276_8_9
Type:
Location: 11391 - 12350 (-)
Gene ID: HRGMv2_2276_8_10
Type: CAZyme
Location: 12398 - 13474 (-)
Gene ID: HRGMv2_2276_8_11
Type: pfam
Location: 13504 - 14817 (-)
Gene ID: HRGMv2_2276_8_12
Type: CAZyme
Location: 14905 - 16023 (-)
Gene ID: HRGMv2_2276_8_13
Type: CAZyme
Location: 16042 - 17286 (-)
Gene ID: HRGMv2_2276_8_14
Type: TC
Location: 17305 - 17985 (-)
Gene ID: HRGMv2_2276_8_15
Type: pfam
Location: 18000 - 19202 (-)
Gene ID: HRGMv2_2276_8_16
Type: TC
Location: 19202 - 21145 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List