Cluster: HRGMv2_2276_CGC14
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_291 | 303340 | 304902 | - | 2.A.49.5.1 |
| pfam | HRGMv2_2276_3 | HRGMv2_2276_3_292 | 304993 | 305901 | - | DUF4340 | DUF4340 |
| pfam | HRGMv2_2276_3 | HRGMv2_2276_3_293 | 305913 | 307310 | - | ABC_transp_aux | DUF7088 |
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_294 | 307320 | 308186 | - | 3.A.1.132.1 |
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_295 | 308170 | 309132 | - | 3.A.1.132.1 |
| STP | HRGMv2_2276_3 | HRGMv2_2276_3_296 | 309951 | 311363 | - | Pribosyltran |
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_297 | 311652 | 313421 | + | 3.A.1.21.1 |
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_298 | 313427 | 315160 | + | 3.A.1.21.1 |
| STP | HRGMv2_2276_3 | HRGMv2_2276_3_299 | 315266 | 316390 | - | Fer4 |
| TC | HRGMv2_2276_3 | HRGMv2_2276_3_300 | 316734 | 317780 | - | 4.D.2.1.5 |
| CAZyme | HRGMv2_2276_3 | HRGMv2_2276_3_301 | 317773 | 318465 | - | CE4 |
| CAZyme | HRGMv2_2276_3 | HRGMv2_2276_3_302 | 318462 | 319544 | - | GT28 |
Gene ID: HRGMv2_2276_3_291
Type: TC
Location: 303340 - 304902 (-)
Type: TC
Location: 303340 - 304902 (-)
Gene ID: HRGMv2_2276_3_292
Type: pfam
Location: 304993 - 305901 (-)
Type: pfam
Location: 304993 - 305901 (-)
Gene ID: HRGMv2_2276_3_293
Type: pfam
Location: 305913 - 307310 (-)
Type: pfam
Location: 305913 - 307310 (-)
Gene ID: HRGMv2_2276_3_294
Type: TC
Location: 307320 - 308186 (-)
Type: TC
Location: 307320 - 308186 (-)
Gene ID: HRGMv2_2276_3_295
Type: TC
Location: 308170 - 309132 (-)
Type: TC
Location: 308170 - 309132 (-)
Gene ID: HRGMv2_2276_3_296
Type: STP
Location: 309951 - 311363 (-)
Type: STP
Location: 309951 - 311363 (-)
Gene ID: HRGMv2_2276_3_297
Type: TC
Location: 311652 - 313421 (+)
Type: TC
Location: 311652 - 313421 (+)
Gene ID: HRGMv2_2276_3_298
Type: TC
Location: 313427 - 315160 (+)
Type: TC
Location: 313427 - 315160 (+)
Gene ID: HRGMv2_2276_3_299
Type: STP
Location: 315266 - 316390 (-)
Type: STP
Location: 315266 - 316390 (-)
Gene ID: HRGMv2_2276_3_300
Type: TC
Location: 316734 - 317780 (-)
Type: TC
Location: 316734 - 317780 (-)
Gene ID: HRGMv2_2276_3_301
Type: CAZyme
Location: 317773 - 318465 (-)
Type: CAZyme
Location: 317773 - 318465 (-)
Gene ID: HRGMv2_2276_3_302
Type: CAZyme
Location: 318462 - 319544 (-)
Type: CAZyme
Location: 318462 - 319544 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.