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Cluster: HRGMv2_2276_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2276_3 HRGMv2_2276_3_1 3 1424 - GT35
CAZyme HRGMv2_2276_3 HRGMv2_2276_3_2 1429 2955 - GH77
TC HRGMv2_2276_3 HRGMv2_2276_3_3 2982 3821 - 3.A.1.1.45
TC HRGMv2_2276_3 HRGMv2_2276_3_4 3821 4663 - 3.A.1.1.45
TC HRGMv2_2276_3 HRGMv2_2276_3_5 4736 6034 - 3.A.1.1.45
STP HRGMv2_2276_3 HRGMv2_2276_3_6 6162 7490 - SBP_bac_1
TC HRGMv2_2276_3 HRGMv2_2276_3_7 7432 9207 - 8.A.59.2.1
TF HRGMv2_2276_3 HRGMv2_2276_3_8 9204 10793 - HTH_AraC | HTH_AraC
pfam HRGMv2_2276_3 HRGMv2_2276_3_9 10982 11848 - YitT_membrane | DUF2179
TC HRGMv2_2276_3 HRGMv2_2276_3_10 11835 13502 - 2.A.15.1.8
Gene ID: HRGMv2_2276_3_1
Type: CAZyme
Location: 3 - 1424 (-)
Gene ID: HRGMv2_2276_3_2
Type: CAZyme
Location: 1429 - 2955 (-)
Gene ID: HRGMv2_2276_3_3
Type: TC
Location: 2982 - 3821 (-)
Gene ID: HRGMv2_2276_3_4
Type: TC
Location: 3821 - 4663 (-)
Gene ID: HRGMv2_2276_3_5
Type: TC
Location: 4736 - 6034 (-)
Gene ID: HRGMv2_2276_3_6
Type: STP
Location: 6162 - 7490 (-)
Gene ID: HRGMv2_2276_3_7
Type: TC
Location: 7432 - 9207 (-)
Gene ID: HRGMv2_2276_3_8
Type: TF
Location: 9204 - 10793 (-)
Gene ID: HRGMv2_2276_3_9
Type: pfam
Location: 10982 - 11848 (-)
Gene ID: HRGMv2_2276_3_10
Type: TC
Location: 11835 - 13502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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