Cluster: HRGMv2_2276_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2276_2 | HRGMv2_2276_2_359 | 387871 | 389985 | - | GH13_11 |
| TF | HRGMv2_2276_2 | HRGMv2_2276_2_360 | 390019 | 390639 | - | GerE |
| pfam | HRGMv2_2276_2 | HRGMv2_2276_2_361 | 390646 | 391707 | - | HATPase_c | HisKA_3 |
| TC | HRGMv2_2276_2 | HRGMv2_2276_2_362 | 391823 | 392752 | + | 3.A.1.105.9 |
Gene ID: HRGMv2_2276_2_359
Type: CAZyme
Location: 387871 - 389985 (-)
Type: CAZyme
Location: 387871 - 389985 (-)
Gene ID: HRGMv2_2276_2_360
Type: TF
Location: 390019 - 390639 (-)
Type: TF
Location: 390019 - 390639 (-)
Gene ID: HRGMv2_2276_2_361
Type: pfam
Location: 390646 - 391707 (-)
Type: pfam
Location: 390646 - 391707 (-)
Gene ID: HRGMv2_2276_2_362
Type: TC
Location: 391823 - 392752 (+)
Type: TC
Location: 391823 - 392752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Extibacter
Species
Extibacter hylemonae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.