Cluster: HRGMv2_2270_CGC99
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_01243
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_39 | HRGMv2_2270_39_31 | 31594 | 32472 | + | 3.A.1.1.7 |
| TC | HRGMv2_2270_39 | HRGMv2_2270_39_32 | 32472 | 33299 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2270_39 | HRGMv2_2270_39_33 | 33354 | 35501 | + | GH3 |
| CAZyme | HRGMv2_2270_39 | HRGMv2_2270_39_34 | 35501 | 37825 | + | GH31_3 |
| TC | HRGMv2_2270_39 | HRGMv2_2270_39_35 | 37848 | 39536 | - | 1.B.52.2.2 |
Gene ID: HRGMv2_2270_39_31
Type: TC
Location: 31594 - 32472 (+)
Type: TC
Location: 31594 - 32472 (+)
Gene ID: HRGMv2_2270_39_32
Type: TC
Location: 32472 - 33299 (+)
Type: TC
Location: 32472 - 33299 (+)
Gene ID: HRGMv2_2270_39_33
Type: CAZyme
Location: 33354 - 35501 (+)
Type: CAZyme
Location: 33354 - 35501 (+)
Gene ID: HRGMv2_2270_39_34
Type: CAZyme
Location: 35501 - 37825 (+)
Type: CAZyme
Location: 35501 - 37825 (+)
Gene ID: HRGMv2_2270_39_35
Type: TC
Location: 37848 - 39536 (-)
Type: TC
Location: 37848 - 39536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.