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Cluster: HRGMv2_2270_CGC98

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_39 HRGMv2_2270_39_8 5151 5594 - 4.A.6.1.14
TC HRGMv2_2270_39 HRGMv2_2270_39_9 5837 7603 + 8.A.59.2.1
TF HRGMv2_2270_39 HRGMv2_2270_39_10 7600 8433 + HTH_AraC | HTH_AraC
STP HRGMv2_2270_39 HRGMv2_2270_39_11 8596 10011 + SBP_bac_1
TC HRGMv2_2270_39 HRGMv2_2270_39_12 10080 10943 + 3.A.1.1.28
TC HRGMv2_2270_39 HRGMv2_2270_39_13 10943 11791 + 3.A.1.1.45
CAZyme HRGMv2_2270_39 HRGMv2_2270_39_14 11815 12903 + GH105
Gene ID: HRGMv2_2270_39_8
Type: TC
Location: 5151 - 5594 (-)
Gene ID: HRGMv2_2270_39_9
Type: TC
Location: 5837 - 7603 (+)
Gene ID: HRGMv2_2270_39_10
Type: TF
Location: 7600 - 8433 (+)
Gene ID: HRGMv2_2270_39_11
Type: STP
Location: 8596 - 10011 (+)
Gene ID: HRGMv2_2270_39_12
Type: TC
Location: 10080 - 10943 (+)
Gene ID: HRGMv2_2270_39_13
Type: TC
Location: 10943 - 11791 (+)
Gene ID: HRGMv2_2270_39_14
Type: CAZyme
Location: 11815 - 12903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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