Cluster: HRGMv2_2270_CGC94
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_01131
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_35 | HRGMv2_2270_35_13 | 15742 | 17664 | - | 9.B.33.1.1 |
| TC | HRGMv2_2270_35 | HRGMv2_2270_35_14 | 17723 | 18670 | + | 3.A.1.1.7 |
| TC | HRGMv2_2270_35 | HRGMv2_2270_35_15 | 18673 | 19506 | + | 3.A.1.1.17 |
| STP | HRGMv2_2270_35 | HRGMv2_2270_35_16 | 19542 | 20936 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2270_35 | HRGMv2_2270_35_17 | 20967 | 24179 | + | GH106 |
Gene ID: HRGMv2_2270_35_13
Type: TC
Location: 15742 - 17664 (-)
Type: TC
Location: 15742 - 17664 (-)
Gene ID: HRGMv2_2270_35_14
Type: TC
Location: 17723 - 18670 (+)
Type: TC
Location: 17723 - 18670 (+)
Gene ID: HRGMv2_2270_35_15
Type: TC
Location: 18673 - 19506 (+)
Type: TC
Location: 18673 - 19506 (+)
Gene ID: HRGMv2_2270_35_16
Type: STP
Location: 19542 - 20936 (+)
Type: STP
Location: 19542 - 20936 (+)
Gene ID: HRGMv2_2270_35_17
Type: CAZyme
Location: 20967 - 24179 (+)
Type: CAZyme
Location: 20967 - 24179 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.