Cluster: HRGMv2_2270_CGC92
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_03797
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_34 | HRGMv2_2270_34_47 | 46176 | 48578 | - | GH43_26 |
| TF | HRGMv2_2270_34 | HRGMv2_2270_34_48 | 48594 | 49577 | - | LacI |
| CAZyme | HRGMv2_2270_34 | HRGMv2_2270_34_49 | 49644 | 51146 | - | GH51_1 |
| TC | HRGMv2_2270_34 | HRGMv2_2270_34_50 | 51348 | 52190 | - | 3.A.1.1.34 |
| TC | HRGMv2_2270_34 | HRGMv2_2270_34_51 | 52201 | 53121 | - | 3.A.1.1.4 |
| TC | HRGMv2_2270_34 | HRGMv2_2270_34_52 | 53147 | 54496 | - | 3.A.1.1.3 |
| CAZyme | HRGMv2_2270_34 | HRGMv2_2270_34_53 | 55267 | 56583 | - | GH28 |
Gene ID: HRGMv2_2270_34_47
Type: CAZyme
Location: 46176 - 48578 (-)
Type: CAZyme
Location: 46176 - 48578 (-)
Gene ID: HRGMv2_2270_34_48
Type: TF
Location: 48594 - 49577 (-)
Type: TF
Location: 48594 - 49577 (-)
Gene ID: HRGMv2_2270_34_49
Type: CAZyme
Location: 49644 - 51146 (-)
Type: CAZyme
Location: 49644 - 51146 (-)
Gene ID: HRGMv2_2270_34_50
Type: TC
Location: 51348 - 52190 (-)
Type: TC
Location: 51348 - 52190 (-)
Gene ID: HRGMv2_2270_34_51
Type: TC
Location: 52201 - 53121 (-)
Type: TC
Location: 52201 - 53121 (-)
Gene ID: HRGMv2_2270_34_52
Type: TC
Location: 53147 - 54496 (-)
Type: TC
Location: 53147 - 54496 (-)
Gene ID: HRGMv2_2270_34_53
Type: CAZyme
Location: 55267 - 56583 (-)
Type: CAZyme
Location: 55267 - 56583 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.