Cluster: HRGMv2_2270_CGC87
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_30 | HRGMv2_2270_30_72 | 67543 | 68946 | - | 5.A.1.2.1 |
| pfam | HRGMv2_2270_30 | HRGMv2_2270_30_73 | 69103 | 69321 | - | HTH_26 |
| pfam | HRGMv2_2270_30 | HRGMv2_2270_30_74 | 69332 | 69778 | - | DUF2975 |
| CAZyme | HRGMv2_2270_30 | HRGMv2_2270_30_75 | 69998 | 71068 | - | GH170 |
| TC | HRGMv2_2270_30 | HRGMv2_2270_30_76 | 71073 | 72512 | - | 4.A.1.2.7 |
Gene ID: HRGMv2_2270_30_72
Type: TC
Location: 67543 - 68946 (-)
Type: TC
Location: 67543 - 68946 (-)
Gene ID: HRGMv2_2270_30_73
Type: pfam
Location: 69103 - 69321 (-)
Type: pfam
Location: 69103 - 69321 (-)
Gene ID: HRGMv2_2270_30_74
Type: pfam
Location: 69332 - 69778 (-)
Type: pfam
Location: 69332 - 69778 (-)
Gene ID: HRGMv2_2270_30_75
Type: CAZyme
Location: 69998 - 71068 (-)
Type: CAZyme
Location: 69998 - 71068 (-)
Gene ID: HRGMv2_2270_30_76
Type: TC
Location: 71073 - 72512 (-)
Type: TC
Location: 71073 - 72512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2270_30_73 | vegetarian > vegan | 2.37781 | 0.03476 |