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Cluster: HRGMv2_2270_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_26 HRGMv2_2270_26_15 14967 15902 + 3.A.1.1.23
TC HRGMv2_2270_26 HRGMv2_2270_26_16 15906 16727 + 3.A.1.1.34
CAZyme HRGMv2_2270_26 HRGMv2_2270_26_17 16782 18767 + GH42
STP HRGMv2_2270_26 HRGMv2_2270_26_18 19439 20680 + SBP_bac_1
TC HRGMv2_2270_26 HRGMv2_2270_26_19 20741 21664 + 3.A.1.1.25
TC HRGMv2_2270_26 HRGMv2_2270_26_20 21667 22488 + 3.A.1.1.11
CAZyme HRGMv2_2270_26 HRGMv2_2270_26_21 22501 25500 + GH2
CAZyme HRGMv2_2270_26 HRGMv2_2270_26_22 25523 27868 + GH65
TC HRGMv2_2270_26 HRGMv2_2270_26_23 27865 28767 + 2.A.7.3.29
Gene ID: HRGMv2_2270_26_15
Type: TC
Location: 14967 - 15902 (+)
Gene ID: HRGMv2_2270_26_16
Type: TC
Location: 15906 - 16727 (+)
Gene ID: HRGMv2_2270_26_17
Type: CAZyme
Location: 16782 - 18767 (+)
Gene ID: HRGMv2_2270_26_18
Type: STP
Location: 19439 - 20680 (+)
Gene ID: HRGMv2_2270_26_19
Type: TC
Location: 20741 - 21664 (+)
Gene ID: HRGMv2_2270_26_20
Type: TC
Location: 21667 - 22488 (+)
Gene ID: HRGMv2_2270_26_21
Type: CAZyme
Location: 22501 - 25500 (+)
Gene ID: HRGMv2_2270_26_22
Type: CAZyme
Location: 25523 - 27868 (+)
Gene ID: HRGMv2_2270_26_23
Type: TC
Location: 27865 - 28767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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