Cluster: HRGMv2_2270_CGC76
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_24 | HRGMv2_2270_24_7 | 6898 | 7650 | + | 2.A.86.1.3 |
| pfam | HRGMv2_2270_24 | HRGMv2_2270_24_8 | 7729 | 8466 | - | adh_short | Epimerase | adh_short_C2 | SDR |
| TC | HRGMv2_2270_24 | HRGMv2_2270_24_9 | 8471 | 9766 | - | 2.A.40.5.1 |
| pfam | HRGMv2_2270_24 | HRGMv2_2270_24_10 | 9799 | 10791 | - | RibD_C |
| TC | HRGMv2_2270_24 | HRGMv2_2270_24_11 | 10841 | 12130 | - | 2.A.40.1.4 |
| TF | HRGMv2_2270_24 | HRGMv2_2270_24_12 | 12344 | 13372 | + | LacI |
| CAZyme | HRGMv2_2270_24 | HRGMv2_2270_24_13 | 13569 | 14888 | - | GH4 |
Gene ID: HRGMv2_2270_24_7
Type: TC
Location: 6898 - 7650 (+)
Type: TC
Location: 6898 - 7650 (+)
Gene ID: HRGMv2_2270_24_8
Type: pfam
Location: 7729 - 8466 (-)
Type: pfam
Location: 7729 - 8466 (-)
Gene ID: HRGMv2_2270_24_9
Type: TC
Location: 8471 - 9766 (-)
Type: TC
Location: 8471 - 9766 (-)
Gene ID: HRGMv2_2270_24_10
Type: pfam
Location: 9799 - 10791 (-)
Type: pfam
Location: 9799 - 10791 (-)
Gene ID: HRGMv2_2270_24_11
Type: TC
Location: 10841 - 12130 (-)
Type: TC
Location: 10841 - 12130 (-)
Gene ID: HRGMv2_2270_24_12
Type: TF
Location: 12344 - 13372 (+)
Type: TF
Location: 12344 - 13372 (+)
Gene ID: HRGMv2_2270_24_13
Type: CAZyme
Location: 13569 - 14888 (-)
Type: CAZyme
Location: 13569 - 14888 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.