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Cluster: HRGMv2_2270_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_23 HRGMv2_2270_23_5 5945 7213 + 9.A.40.2.1
pfam HRGMv2_2270_23 HRGMv2_2270_23_6 7226 7567 + DsrE
pfam HRGMv2_2270_23 HRGMv2_2270_23_7 7709 8068 - DUF3792
TC HRGMv2_2270_23 HRGMv2_2270_23_8 8331 9881 + 3.A.1.1.9
TC HRGMv2_2270_23 HRGMv2_2270_23_9 9904 10800 + 3.A.1.1.10
TC HRGMv2_2270_23 HRGMv2_2270_23_10 10800 11660 + 3.A.1.1.10
sulfatase HRGMv2_2270_23 HRGMv2_2270_23_11 11666 13135 + S1_86
sulfatase HRGMv2_2270_23 HRGMv2_2270_23_12 13125 14510 + S1_27;S1_N.C.
CAZyme HRGMv2_2270_23 HRGMv2_2270_23_13 14514 15623 + GH88
pfam HRGMv2_2270_23 HRGMv2_2270_23_14 15639 17129 + DUF3604
CAZyme HRGMv2_2270_23 HRGMv2_2270_23_15 17138 18937 + PL37
TF HRGMv2_2270_23 HRGMv2_2270_23_16 18966 21140 + HTH_AraC | HTH_AraC
TF HRGMv2_2270_23 HRGMv2_2270_23_17 21207 22790 - HTH_AraC
TC HRGMv2_2270_23 HRGMv2_2270_23_18 22805 24565 - 9.B.33.1.1
STP HRGMv2_2270_23 HRGMv2_2270_23_19 24853 26256 + SBP_bac_1
TC HRGMv2_2270_23 HRGMv2_2270_23_20 26275 27165 + 3.A.1.1.34
TC HRGMv2_2270_23 HRGMv2_2270_23_21 27176 28009 + 3.A.1.1.18
Gene ID: HRGMv2_2270_23_5
Type: TC
Location: 5945 - 7213 (+)
Gene ID: HRGMv2_2270_23_6
Type: pfam
Location: 7226 - 7567 (+)
Gene ID: HRGMv2_2270_23_7
Type: pfam
Location: 7709 - 8068 (-)
Gene ID: HRGMv2_2270_23_8
Type: TC
Location: 8331 - 9881 (+)
Gene ID: HRGMv2_2270_23_9
Type: TC
Location: 9904 - 10800 (+)
Gene ID: HRGMv2_2270_23_10
Type: TC
Location: 10800 - 11660 (+)
Gene ID: HRGMv2_2270_23_11
Type: sulfatase
Location: 11666 - 13135 (+)
Gene ID: HRGMv2_2270_23_12
Type: sulfatase
Location: 13125 - 14510 (+)
Gene ID: HRGMv2_2270_23_13
Type: CAZyme
Location: 14514 - 15623 (+)
Gene ID: HRGMv2_2270_23_14
Type: pfam
Location: 15639 - 17129 (+)
Gene ID: HRGMv2_2270_23_15
Type: CAZyme
Location: 17138 - 18937 (+)
Gene ID: HRGMv2_2270_23_16
Type: TF
Location: 18966 - 21140 (+)
Gene ID: HRGMv2_2270_23_17
Type: TF
Location: 21207 - 22790 (-)
Gene ID: HRGMv2_2270_23_18
Type: TC
Location: 22805 - 24565 (-)
Gene ID: HRGMv2_2270_23_19
Type: STP
Location: 24853 - 26256 (+)
Gene ID: HRGMv2_2270_23_20
Type: TC
Location: 26275 - 27165 (+)
Gene ID: HRGMv2_2270_23_21
Type: TC
Location: 27176 - 28009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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