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Cluster: HRGMv2_2270_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_22 HRGMv2_2270_22_41 43745 44578 - 3.A.1.1.34
TC HRGMv2_2270_22 HRGMv2_2270_22_42 44590 45483 - 3.A.1.1.34
TC HRGMv2_2270_22 HRGMv2_2270_22_43 45547 46914 - 3.A.1.1.34
TF HRGMv2_2270_22 HRGMv2_2270_22_44 47188 47871 + GntR
CAZyme HRGMv2_2270_22 HRGMv2_2270_22_45 47868 49445 + CBM91 | GH43_12
CAZyme HRGMv2_2270_22 HRGMv2_2270_22_46 49526 51913 - GH31_15
TC HRGMv2_2270_22 HRGMv2_2270_22_47 51935 52756 - 3.A.1.1.34
TC HRGMv2_2270_22 HRGMv2_2270_22_48 52769 53647 - 3.A.1.1.11
TC HRGMv2_2270_22 HRGMv2_2270_22_49 53661 55028 - 3.A.1.1.40
TF HRGMv2_2270_22 HRGMv2_2270_22_50 55322 56359 + LacI
TC HRGMv2_2270_22 HRGMv2_2270_22_51 56408 57079 - 9.B.156.3.1
Gene ID: HRGMv2_2270_22_41
Type: TC
Location: 43745 - 44578 (-)
Gene ID: HRGMv2_2270_22_42
Type: TC
Location: 44590 - 45483 (-)
Gene ID: HRGMv2_2270_22_43
Type: TC
Location: 45547 - 46914 (-)
Gene ID: HRGMv2_2270_22_44
Type: TF
Location: 47188 - 47871 (+)
Gene ID: HRGMv2_2270_22_45
Type: CAZyme
Location: 47868 - 49445 (+)
Gene ID: HRGMv2_2270_22_46
Type: CAZyme
Location: 49526 - 51913 (-)
Gene ID: HRGMv2_2270_22_47
Type: TC
Location: 51935 - 52756 (-)
Gene ID: HRGMv2_2270_22_48
Type: TC
Location: 52769 - 53647 (-)
Gene ID: HRGMv2_2270_22_49
Type: TC
Location: 53661 - 55028 (-)
Gene ID: HRGMv2_2270_22_50
Type: TF
Location: 55322 - 56359 (+)
Gene ID: HRGMv2_2270_22_51
Type: TC
Location: 56408 - 57079 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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