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Cluster: HRGMv2_2270_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_21 HRGMv2_2270_21_89 94100 95056 - 3.A.1.2.15
TC HRGMv2_2270_21 HRGMv2_2270_21_90 95053 96558 - 3.A.1.2.20
pfam HRGMv2_2270_21 HRGMv2_2270_21_91 96558 97505 - BPD_transp_2
pfam HRGMv2_2270_21 HRGMv2_2270_21_92 97583 98827 - Peripla_BP_4
CAZyme HRGMv2_2270_21 HRGMv2_2270_21_93 98842 99951 - GH179
CAZyme HRGMv2_2270_21 HRGMv2_2270_21_94 100144 102570 - GH39
TC HRGMv2_2270_21 HRGMv2_2270_21_95 102710 104503 - 3.A.1.135.7
TC HRGMv2_2270_21 HRGMv2_2270_21_96 104496 106226 - 3.A.1.135.7
Gene ID: HRGMv2_2270_21_89
Type: TC
Location: 94100 - 95056 (-)
Gene ID: HRGMv2_2270_21_90
Type: TC
Location: 95053 - 96558 (-)
Gene ID: HRGMv2_2270_21_91
Type: pfam
Location: 96558 - 97505 (-)
Gene ID: HRGMv2_2270_21_92
Type: pfam
Location: 97583 - 98827 (-)
Gene ID: HRGMv2_2270_21_93
Type: CAZyme
Location: 98842 - 99951 (-)
Gene ID: HRGMv2_2270_21_94
Type: CAZyme
Location: 100144 - 102570 (-)
Gene ID: HRGMv2_2270_21_95
Type: TC
Location: 102710 - 104503 (-)
Gene ID: HRGMv2_2270_21_96
Type: TC
Location: 104496 - 106226 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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