Cluster: HRGMv2_2270_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_1 | HRGMv2_2270_1_201 | 212245 | 212985 | - | GH18 |
| pfam | HRGMv2_2270_1 | HRGMv2_2270_1_202 | 213152 | 214132 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_2270_1 | HRGMv2_2270_1_203 | 214139 | 216199 | - | GH164 | GH42 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_204 | 216255 | 217076 | - | 3.A.1.1.25 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_205 | 217076 | 217990 | - | 3.A.1.1.41 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_206 | 218020 | 219336 | - | 3.A.1.1.17 |
Gene ID: HRGMv2_2270_1_201
Type: CAZyme
Location: 212245 - 212985 (-)
Type: CAZyme
Location: 212245 - 212985 (-)
Gene ID: HRGMv2_2270_1_202
Type: pfam
Location: 213152 - 214132 (-)
Type: pfam
Location: 213152 - 214132 (-)
Gene ID: HRGMv2_2270_1_203
Type: CAZyme
Location: 214139 - 216199 (-)
Type: CAZyme
Location: 214139 - 216199 (-)
Gene ID: HRGMv2_2270_1_204
Type: TC
Location: 216255 - 217076 (-)
Type: TC
Location: 216255 - 217076 (-)
Gene ID: HRGMv2_2270_1_205
Type: TC
Location: 217076 - 217990 (-)
Type: TC
Location: 217076 - 217990 (-)
Gene ID: HRGMv2_2270_1_206
Type: TC
Location: 218020 - 219336 (-)
Type: TC
Location: 218020 - 219336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.