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Cluster: HRGMv2_2270_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_20 HRGMv2_2270_20_43 48272 50149 + 4.A.1.2.11
CAZyme HRGMv2_2270_20 HRGMv2_2270_20_44 50161 51567 + GH1
pfam HRGMv2_2270_20 HRGMv2_2270_20_45 51597 52124 - Fic
TC HRGMv2_2270_20 HRGMv2_2270_20_46 52285 53238 - 3.A.1.2.12
TC HRGMv2_2270_20 HRGMv2_2270_20_47 53235 54344 - 3.A.1.2.17
TC HRGMv2_2270_20 HRGMv2_2270_20_48 54341 55879 - 3.A.1.2.17
TC HRGMv2_2270_20 HRGMv2_2270_20_49 55980 57164 - 3.A.1.2.17
TC HRGMv2_2270_20 HRGMv2_2270_20_50 57344 58687 + 2.A.66.1.37
STP HRGMv2_2270_20 HRGMv2_2270_20_51 58665 60047 - B12-binding
NULL(UNKNOWN) HRGMv2_2270_20 HRGMv2_2270_20_52 60127 60807 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2270_20 HRGMv2_2270_20_53 61087 63711 + 8.A.7.1.5
Gene ID: HRGMv2_2270_20_43
Type: TC
Location: 48272 - 50149 (+)
Gene ID: HRGMv2_2270_20_44
Type: CAZyme
Location: 50161 - 51567 (+)
Gene ID: HRGMv2_2270_20_45
Type: pfam
Location: 51597 - 52124 (-)
Gene ID: HRGMv2_2270_20_46
Type: TC
Location: 52285 - 53238 (-)
Gene ID: HRGMv2_2270_20_47
Type: TC
Location: 53235 - 54344 (-)
Gene ID: HRGMv2_2270_20_48
Type: TC
Location: 54341 - 55879 (-)
Gene ID: HRGMv2_2270_20_49
Type: TC
Location: 55980 - 57164 (-)
Gene ID: HRGMv2_2270_20_50
Type: TC
Location: 57344 - 58687 (+)
Gene ID: HRGMv2_2270_20_51
Type: STP
Location: 58665 - 60047 (-)
Gene ID: HRGMv2_2270_20_52
Type:
Location: 60127 - 60807 (+)
Gene ID: HRGMv2_2270_20_53
Type: TC
Location: 61087 - 63711 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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