dbCAN Logo

Cluster: HRGMv2_2270_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_18 HRGMv2_2270_18_60 67872 68600 + 3.A.1.105.14
pfam HRGMv2_2270_18 HRGMv2_2270_18_61 68593 69336 + ABC2_membrane | ABC2_membrane_3
CAZyme HRGMv2_2270_18 HRGMv2_2270_18_62 69443 71401 - GH20
TF HRGMv2_2270_18 HRGMv2_2270_18_63 71405 72922 - HTH_AraC | HTH_AraC
TC HRGMv2_2270_18 HRGMv2_2270_18_64 72919 74733 - 8.A.59.2.1
TC HRGMv2_2270_18 HRGMv2_2270_18_65 74758 75588 - 3.A.1.1.47
TC HRGMv2_2270_18 HRGMv2_2270_18_66 75588 76469 - 3.A.1.1.20
Gene ID: HRGMv2_2270_18_60
Type: TC
Location: 67872 - 68600 (+)
Gene ID: HRGMv2_2270_18_61
Type: pfam
Location: 68593 - 69336 (+)
Gene ID: HRGMv2_2270_18_62
Type: CAZyme
Location: 69443 - 71401 (-)
Gene ID: HRGMv2_2270_18_63
Type: TF
Location: 71405 - 72922 (-)
Gene ID: HRGMv2_2270_18_64
Type: TC
Location: 72919 - 74733 (-)
Gene ID: HRGMv2_2270_18_65
Type: TC
Location: 74758 - 75588 (-)
Gene ID: HRGMv2_2270_18_66
Type: TC
Location: 75588 - 76469 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List