Cluster: HRGMv2_2270_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_03621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_118 | 147311 | 149173 | - | 8.A.59.2.1 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_119 | 149282 | 150127 | - | 3.A.1.1.7 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_120 | 150124 | 151041 | - | 3.A.1.1.18 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_121 | 151121 | 152419 | - | 3.A.1.1.21 |
| pfam | HRGMv2_2270_1 | HRGMv2_2270_1_122 | 152852 | 153193 | - | YjbR |
| CAZyme | HRGMv2_2270_1 | HRGMv2_2270_1_123 | 153329 | 154513 | - | CE4 |
Gene ID: HRGMv2_2270_1_118
Type: TC
Location: 147311 - 149173 (-)
Type: TC
Location: 147311 - 149173 (-)
Gene ID: HRGMv2_2270_1_119
Type: TC
Location: 149282 - 150127 (-)
Type: TC
Location: 149282 - 150127 (-)
Gene ID: HRGMv2_2270_1_120
Type: TC
Location: 150124 - 151041 (-)
Type: TC
Location: 150124 - 151041 (-)
Gene ID: HRGMv2_2270_1_121
Type: TC
Location: 151121 - 152419 (-)
Type: TC
Location: 151121 - 152419 (-)
Gene ID: HRGMv2_2270_1_122
Type: pfam
Location: 152852 - 153193 (-)
Type: pfam
Location: 152852 - 153193 (-)
Gene ID: HRGMv2_2270_1_123
Type: CAZyme
Location: 153329 - 154513 (-)
Type: CAZyme
Location: 153329 - 154513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.