Cluster: HRGMv2_2270_CGC59
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_01720
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_95 | 106631 | 107605 | + | 3.A.1.1.34 |
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_96 | 107605 | 108450 | + | 3.A.1.1.24 |
| TF | HRGMv2_2270_15 | HRGMv2_2270_15_97 | 108484 | 109407 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2270_15 | HRGMv2_2270_15_98 | 109527 | 111617 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2270_15 | HRGMv2_2270_15_99 | 112116 | 112238 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2270_15 | HRGMv2_2270_15_100 | 112844 | 113014 | - | DUF1540 |
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_101 | 113194 | 114546 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_2270_15_95
Type: TC
Location: 106631 - 107605 (+)
Type: TC
Location: 106631 - 107605 (+)
Gene ID: HRGMv2_2270_15_96
Type: TC
Location: 107605 - 108450 (+)
Type: TC
Location: 107605 - 108450 (+)
Gene ID: HRGMv2_2270_15_97
Type: TF
Location: 108484 - 109407 (-)
Type: TF
Location: 108484 - 109407 (-)
Gene ID: HRGMv2_2270_15_98
Type: CAZyme
Location: 109527 - 111617 (+)
Type: CAZyme
Location: 109527 - 111617 (+)
Gene ID: HRGMv2_2270_15_99
Type:
Location: 112116 - 112238 (-)
Type:
Location: 112116 - 112238 (-)
Gene ID: HRGMv2_2270_15_100
Type: pfam
Location: 112844 - 113014 (-)
Type: pfam
Location: 112844 - 113014 (-)
Gene ID: HRGMv2_2270_15_101
Type: TC
Location: 113194 - 114546 (+)
Type: TC
Location: 113194 - 114546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.