Cluster: HRGMv2_2270_CGC58
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_00378
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_15 | HRGMv2_2270_15_46 | 54741 | 56015 | - | CE12 |
| TF | HRGMv2_2270_15 | HRGMv2_2270_15_47 | 56042 | 57577 | - | HTH_AraC |
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_48 | 57549 | 59363 | - | 8.A.59.2.1 |
| STP | HRGMv2_2270_15 | HRGMv2_2270_15_49 | 59610 | 60983 | + | SBP_bac_1 |
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_50 | 61097 | 61990 | + | 3.A.1.1.11 |
| TC | HRGMv2_2270_15 | HRGMv2_2270_15_51 | 61993 | 62838 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_2270_15 | HRGMv2_2270_15_52 | 62889 | 63938 | + | GH105 |
Gene ID: HRGMv2_2270_15_46
Type: CAZyme
Location: 54741 - 56015 (-)
Type: CAZyme
Location: 54741 - 56015 (-)
Gene ID: HRGMv2_2270_15_47
Type: TF
Location: 56042 - 57577 (-)
Type: TF
Location: 56042 - 57577 (-)
Gene ID: HRGMv2_2270_15_48
Type: TC
Location: 57549 - 59363 (-)
Type: TC
Location: 57549 - 59363 (-)
Gene ID: HRGMv2_2270_15_49
Type: STP
Location: 59610 - 60983 (+)
Type: STP
Location: 59610 - 60983 (+)
Gene ID: HRGMv2_2270_15_50
Type: TC
Location: 61097 - 61990 (+)
Type: TC
Location: 61097 - 61990 (+)
Gene ID: HRGMv2_2270_15_51
Type: TC
Location: 61993 - 62838 (+)
Type: TC
Location: 61993 - 62838 (+)
Gene ID: HRGMv2_2270_15_52
Type: CAZyme
Location: 62889 - 63938 (+)
Type: CAZyme
Location: 62889 - 63938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.