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Cluster: HRGMv2_2270_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_14 HRGMv2_2270_14_21 27468 28430 + 3.A.1.1.10
TC HRGMv2_2270_14 HRGMv2_2270_14_22 28465 29376 + 3.A.1.1.10
TC HRGMv2_2270_14 HRGMv2_2270_14_23 29424 31073 + 3.A.1.1.10
sulfatase HRGMv2_2270_14 HRGMv2_2270_14_24 31350 32813 + S1_53
CAZyme HRGMv2_2270_14 HRGMv2_2270_14_25 32841 34013 + GH88
CAZyme HRGMv2_2270_14 HRGMv2_2270_14_26 34027 35811 + PL37
CAZyme HRGMv2_2270_14 HRGMv2_2270_14_27 36443 38143 - GH13_31
CAZyme HRGMv2_2270_14 HRGMv2_2270_14_28 38320 40641 + GH65
TF HRGMv2_2270_14 HRGMv2_2270_14_29 40586 41566 + LacI
TC HRGMv2_2270_14 HRGMv2_2270_14_30 41579 43366 + 8.A.59.2.1
TF HRGMv2_2270_14 HRGMv2_2270_14_31 43382 44857 + HTH_AraC | HTH_AraC
TC HRGMv2_2270_14 HRGMv2_2270_14_32 45043 46362 + 3.A.1.1.28
TC HRGMv2_2270_14 HRGMv2_2270_14_33 46678 47511 + 3.A.1.1.41
TC HRGMv2_2270_14 HRGMv2_2270_14_34 47514 48362 + 3.A.1.1.28
Gene ID: HRGMv2_2270_14_21
Type: TC
Location: 27468 - 28430 (+)
Gene ID: HRGMv2_2270_14_22
Type: TC
Location: 28465 - 29376 (+)
Gene ID: HRGMv2_2270_14_23
Type: TC
Location: 29424 - 31073 (+)
Gene ID: HRGMv2_2270_14_24
Type: sulfatase
Location: 31350 - 32813 (+)
Gene ID: HRGMv2_2270_14_25
Type: CAZyme
Location: 32841 - 34013 (+)
Gene ID: HRGMv2_2270_14_26
Type: CAZyme
Location: 34027 - 35811 (+)
Gene ID: HRGMv2_2270_14_27
Type: CAZyme
Location: 36443 - 38143 (-)
Gene ID: HRGMv2_2270_14_28
Type: CAZyme
Location: 38320 - 40641 (+)
Gene ID: HRGMv2_2270_14_29
Type: TF
Location: 40586 - 41566 (+)
Gene ID: HRGMv2_2270_14_30
Type: TC
Location: 41579 - 43366 (+)
Gene ID: HRGMv2_2270_14_31
Type: TF
Location: 43382 - 44857 (+)
Gene ID: HRGMv2_2270_14_32
Type: TC
Location: 45043 - 46362 (+)
Gene ID: HRGMv2_2270_14_33
Type: TC
Location: 46678 - 47511 (+)
Gene ID: HRGMv2_2270_14_34
Type: TC
Location: 47514 - 48362 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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