Cluster: HRGMv2_2270_CGC52
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_99 | 128043 | 128918 | + | 3.A.1.1.32 |
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_100 | 128918 | 129757 | + | 3.A.1.1.18 |
| pfam | HRGMv2_2270_13 | HRGMv2_2270_13_101 | 129773 | 130657 | + | ROK |
| CAZyme | HRGMv2_2270_13 | HRGMv2_2270_13_102 | 130714 | 132096 | + | GH1 |
| pfam | HRGMv2_2270_13 | HRGMv2_2270_13_103 | 132086 | 134401 | + | Gly_radical | PFL-like |
| pfam | HRGMv2_2270_13 | HRGMv2_2270_13_104 | 134420 | 135331 | + | Radical_SAM | Fer4_12 | Fer4_12 |
| CAZyme | HRGMv2_2270_13 | HRGMv2_2270_13_105 | 135328 | 136683 | + | GH28 |
Gene ID: HRGMv2_2270_13_99
Type: TC
Location: 128043 - 128918 (+)
Type: TC
Location: 128043 - 128918 (+)
Gene ID: HRGMv2_2270_13_100
Type: TC
Location: 128918 - 129757 (+)
Type: TC
Location: 128918 - 129757 (+)
Gene ID: HRGMv2_2270_13_101
Type: pfam
Location: 129773 - 130657 (+)
Type: pfam
Location: 129773 - 130657 (+)
Gene ID: HRGMv2_2270_13_102
Type: CAZyme
Location: 130714 - 132096 (+)
Type: CAZyme
Location: 130714 - 132096 (+)
Gene ID: HRGMv2_2270_13_103
Type: pfam
Location: 132086 - 134401 (+)
Type: pfam
Location: 132086 - 134401 (+)
Gene ID: HRGMv2_2270_13_104
Type: pfam
Location: 134420 - 135331 (+)
Type: pfam
Location: 134420 - 135331 (+)
Gene ID: HRGMv2_2270_13_105
Type: CAZyme
Location: 135328 - 136683 (+)
Type: CAZyme
Location: 135328 - 136683 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.