Cluster: HRGMv2_2270_CGC51
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_83 | 110511 | 111380 | + | 3.A.1.1.28 |
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_84 | 111390 | 112232 | + | 3.A.1.1.41 |
| CAZyme | HRGMv2_2270_13 | HRGMv2_2270_13_85 | 112304 | 114490 | + | CBM66 |
| CAZyme | HRGMv2_2270_13 | HRGMv2_2270_13_86 | 114504 | 116612 | + | CBM66 |
Gene ID: HRGMv2_2270_13_83
Type: TC
Location: 110511 - 111380 (+)
Type: TC
Location: 110511 - 111380 (+)
Gene ID: HRGMv2_2270_13_84
Type: TC
Location: 111390 - 112232 (+)
Type: TC
Location: 111390 - 112232 (+)
Gene ID: HRGMv2_2270_13_85
Type: CAZyme
Location: 112304 - 114490 (+)
Type: CAZyme
Location: 112304 - 114490 (+)
Gene ID: HRGMv2_2270_13_86
Type: CAZyme
Location: 114504 - 116612 (+)
Type: CAZyme
Location: 114504 - 116612 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.