Cluster: HRGMv2_2270_CGC50
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_02697
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_13 | HRGMv2_2270_13_55 | 74957 | 77653 | + | CBM67 | GH78 |
| pfam | HRGMv2_2270_13 | HRGMv2_2270_13_56 | 77891 | 78850 | + | URO-D |
| STP | HRGMv2_2270_13 | HRGMv2_2270_13_57 | 78866 | 80302 | + | SBP_bac_1 |
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_58 | 80326 | 81237 | + | 3.A.1.1.34 |
| TC | HRGMv2_2270_13 | HRGMv2_2270_13_59 | 81234 | 82073 | + | 3.A.1.1.39 |
Gene ID: HRGMv2_2270_13_55
Type: CAZyme
Location: 74957 - 77653 (+)
Type: CAZyme
Location: 74957 - 77653 (+)
Gene ID: HRGMv2_2270_13_56
Type: pfam
Location: 77891 - 78850 (+)
Type: pfam
Location: 77891 - 78850 (+)
Gene ID: HRGMv2_2270_13_57
Type: STP
Location: 78866 - 80302 (+)
Type: STP
Location: 78866 - 80302 (+)
Gene ID: HRGMv2_2270_13_58
Type: TC
Location: 80326 - 81237 (+)
Type: TC
Location: 80326 - 81237 (+)
Gene ID: HRGMv2_2270_13_59
Type: TC
Location: 81234 - 82073 (+)
Type: TC
Location: 81234 - 82073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.