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Cluster: HRGMv2_2270_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_1 HRGMv2_2270_1_98 127702 128559 - 3.A.1.1.11
TC HRGMv2_2270_1 HRGMv2_2270_1_99 128565 129494 - 3.A.1.1.11
TC HRGMv2_2270_1 HRGMv2_2270_1_100 129557 130963 - 3.A.1.1.11
CAZyme HRGMv2_2270_1 HRGMv2_2270_1_101 131295 132419 + GH105
TC HRGMv2_2270_1 HRGMv2_2270_1_102 132513 133856 + 3.A.1.121.4
TC HRGMv2_2270_1 HRGMv2_2270_1_103 133939 135579 - 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_2270_1 HRGMv2_2270_1_104 135790 136440 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2270_1 HRGMv2_2270_1_105 136533 137312 - 3.A.1.3.14
TC HRGMv2_2270_1 HRGMv2_2270_1_106 137329 137979 - 3.A.1.3.14
TC HRGMv2_2270_1 HRGMv2_2270_1_107 137995 138897 - 3.A.1.3.14
Gene ID: HRGMv2_2270_1_98
Type: TC
Location: 127702 - 128559 (-)
Gene ID: HRGMv2_2270_1_99
Type: TC
Location: 128565 - 129494 (-)
Gene ID: HRGMv2_2270_1_100
Type: TC
Location: 129557 - 130963 (-)
Gene ID: HRGMv2_2270_1_101
Type: CAZyme
Location: 131295 - 132419 (+)
Gene ID: HRGMv2_2270_1_102
Type: TC
Location: 132513 - 133856 (+)
Gene ID: HRGMv2_2270_1_103
Type: TC
Location: 133939 - 135579 (-)
Gene ID: HRGMv2_2270_1_104
Type:
Location: 135790 - 136440 (-)
Gene ID: HRGMv2_2270_1_105
Type: TC
Location: 136533 - 137312 (-)
Gene ID: HRGMv2_2270_1_106
Type: TC
Location: 137329 - 137979 (-)
Gene ID: HRGMv2_2270_1_107
Type: TC
Location: 137995 - 138897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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