dbCAN Logo

Cluster: HRGMv2_2270_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_13 HRGMv2_2270_13_39 54134 55042 + 3.A.1.1.7
TC HRGMv2_2270_13 HRGMv2_2270_13_40 55032 55877 + 3.A.1.1.18
pfam HRGMv2_2270_13 HRGMv2_2270_13_41 56007 56936 + IU_nuc_hydro | Sde182_NH-like
CAZyme HRGMv2_2270_13 HRGMv2_2270_13_42 57029 59017 - GH31_4
TC HRGMv2_2270_13 HRGMv2_2270_13_43 59040 59888 - 3.A.1.1.44
TC HRGMv2_2270_13 HRGMv2_2270_13_44 59888 60784 - 3.A.1.1.41
TC HRGMv2_2270_13 HRGMv2_2270_13_45 60856 62139 - 3.A.1.1.44
TF HRGMv2_2270_13 HRGMv2_2270_13_46 62241 63779 - 0035607 | 0036286
TC HRGMv2_2270_13 HRGMv2_2270_13_47 63776 65587 - 8.A.59.2.1
Gene ID: HRGMv2_2270_13_39
Type: TC
Location: 54134 - 55042 (+)
Gene ID: HRGMv2_2270_13_40
Type: TC
Location: 55032 - 55877 (+)
Gene ID: HRGMv2_2270_13_41
Type: pfam
Location: 56007 - 56936 (+)
Gene ID: HRGMv2_2270_13_42
Type: CAZyme
Location: 57029 - 59017 (-)
Gene ID: HRGMv2_2270_13_43
Type: TC
Location: 59040 - 59888 (-)
Gene ID: HRGMv2_2270_13_44
Type: TC
Location: 59888 - 60784 (-)
Gene ID: HRGMv2_2270_13_45
Type: TC
Location: 60856 - 62139 (-)
Gene ID: HRGMv2_2270_13_46
Type: TF
Location: 62241 - 63779 (-)
Gene ID: HRGMv2_2270_13_47
Type: TC
Location: 63776 - 65587 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List