Cluster: HRGMv2_2270_CGC47
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_08553
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_88 | 112182 | 112829 | + | 2.A.115.2.14 |
| pfam | HRGMv2_2270_12 | HRGMv2_2270_12_89 | 112831 | 113757 | + | EamA | EamA |
| TF | HRGMv2_2270_12 | HRGMv2_2270_12_90 | 113833 | 114741 | - | HTH_1 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_91 | 114879 | 116123 | + | 2.A.37.3.3 |
| STP | HRGMv2_2270_12 | HRGMv2_2270_12_92 | 116320 | 118173 | + | EAL | GGDEF |
| CAZyme | HRGMv2_2270_12 | HRGMv2_2270_12_93 | 118428 | 120929 | + | GH31_2 |
Gene ID: HRGMv2_2270_12_88
Type: TC
Location: 112182 - 112829 (+)
Type: TC
Location: 112182 - 112829 (+)
Gene ID: HRGMv2_2270_12_89
Type: pfam
Location: 112831 - 113757 (+)
Type: pfam
Location: 112831 - 113757 (+)
Gene ID: HRGMv2_2270_12_90
Type: TF
Location: 113833 - 114741 (-)
Type: TF
Location: 113833 - 114741 (-)
Gene ID: HRGMv2_2270_12_91
Type: TC
Location: 114879 - 116123 (+)
Type: TC
Location: 114879 - 116123 (+)
Gene ID: HRGMv2_2270_12_92
Type: STP
Location: 116320 - 118173 (+)
Type: STP
Location: 116320 - 118173 (+)
Gene ID: HRGMv2_2270_12_93
Type: CAZyme
Location: 118428 - 120929 (+)
Type: CAZyme
Location: 118428 - 120929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.