Cluster: HRGMv2_2270_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_31 | 44824 | 46602 | + | 9.B.33.1.1 |
| STP | HRGMv2_2270_12 | HRGMv2_2270_12_32 | 46783 | 48162 | + | SBP_bac_1 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_33 | 48184 | 49101 | + | 3.A.1.1.11 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_34 | 49118 | 49969 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_2270_12 | HRGMv2_2270_12_35 | 50002 | 51432 | + | GH43_35 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_36 | 51756 | 53318 | + | 3.A.1.121.3 |
Gene ID: HRGMv2_2270_12_31
Type: TC
Location: 44824 - 46602 (+)
Type: TC
Location: 44824 - 46602 (+)
Gene ID: HRGMv2_2270_12_32
Type: STP
Location: 46783 - 48162 (+)
Type: STP
Location: 46783 - 48162 (+)
Gene ID: HRGMv2_2270_12_33
Type: TC
Location: 48184 - 49101 (+)
Type: TC
Location: 48184 - 49101 (+)
Gene ID: HRGMv2_2270_12_34
Type: TC
Location: 49118 - 49969 (+)
Type: TC
Location: 49118 - 49969 (+)
Gene ID: HRGMv2_2270_12_35
Type: CAZyme
Location: 50002 - 51432 (+)
Type: CAZyme
Location: 50002 - 51432 (+)
Gene ID: HRGMv2_2270_12_36
Type: TC
Location: 51756 - 53318 (+)
Type: TC
Location: 51756 - 53318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.