Cluster: HRGMv2_2270_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_12 | HRGMv2_2270_12_9 | 8722 | 15198 | + | GH28 | PL9_1 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_10 | 15378 | 17123 | + | 3.A.1.135.7 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_11 | 17113 | 18903 | + | 3.A.1.135.7 |
| CAZyme | HRGMv2_2270_12 | HRGMv2_2270_12_12 | 18950 | 20776 | - | GH110 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_13 | 20809 | 22176 | - | 3.A.1.1.36 |
| TC | HRGMv2_2270_12 | HRGMv2_2270_12_14 | 22192 | 23091 | - | 3.A.1.1.17 |
Gene ID: HRGMv2_2270_12_9
Type: CAZyme
Location: 8722 - 15198 (+)
Type: CAZyme
Location: 8722 - 15198 (+)
Gene ID: HRGMv2_2270_12_10
Type: TC
Location: 15378 - 17123 (+)
Type: TC
Location: 15378 - 17123 (+)
Gene ID: HRGMv2_2270_12_11
Type: TC
Location: 17113 - 18903 (+)
Type: TC
Location: 17113 - 18903 (+)
Gene ID: HRGMv2_2270_12_12
Type: CAZyme
Location: 18950 - 20776 (-)
Type: CAZyme
Location: 18950 - 20776 (-)
Gene ID: HRGMv2_2270_12_13
Type: TC
Location: 20809 - 22176 (-)
Type: TC
Location: 20809 - 22176 (-)
Gene ID: HRGMv2_2270_12_14
Type: TC
Location: 22192 - 23091 (-)
Type: TC
Location: 22192 - 23091 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.