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Cluster: HRGMv2_2270_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_10 HRGMv2_2270_10_35 37783 38655 + 3.A.1.1.28
TC HRGMv2_2270_10 HRGMv2_2270_10_36 38655 39491 + 3.A.1.1.45
STP HRGMv2_2270_10 HRGMv2_2270_10_37 39549 40907 + SBP_bac_1
TF HRGMv2_2270_10 HRGMv2_2270_10_38 40989 42539 + HTH_AraC | HTH_AraC
TC HRGMv2_2270_10 HRGMv2_2270_10_39 42520 44322 + 8.A.59.2.1
sulfatase HRGMv2_2270_10 HRGMv2_2270_10_40 44319 45779 + S1_N.C.
CAZyme HRGMv2_2270_10 HRGMv2_2270_10_41 45816 46790 - CE8
Gene ID: HRGMv2_2270_10_35
Type: TC
Location: 37783 - 38655 (+)
Gene ID: HRGMv2_2270_10_36
Type: TC
Location: 38655 - 39491 (+)
Gene ID: HRGMv2_2270_10_37
Type: STP
Location: 39549 - 40907 (+)
Gene ID: HRGMv2_2270_10_38
Type: TF
Location: 40989 - 42539 (+)
Gene ID: HRGMv2_2270_10_39
Type: TC
Location: 42520 - 44322 (+)
Gene ID: HRGMv2_2270_10_40
Type: sulfatase
Location: 44319 - 45779 (+)
Gene ID: HRGMv2_2270_10_41
Type: CAZyme
Location: 45816 - 46790 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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