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Cluster: HRGMv2_2270_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_9 HRGMv2_2270_9_96 111297 112334 + GH177
pfam HRGMv2_2270_9 HRGMv2_2270_9_97 112719 114005 + PGI
CAZyme HRGMv2_2270_9 HRGMv2_2270_9_98 113992 115059 + GH177
pfam HRGMv2_2270_9 HRGMv2_2270_9_99 115074 115925 + AP_endonuc_2
TC HRGMv2_2270_9 HRGMv2_2270_9_100 115957 117369 + 3.A.1.1.40
TC HRGMv2_2270_9 HRGMv2_2270_9_101 117386 118318 + 3.A.1.1.11
TC HRGMv2_2270_9 HRGMv2_2270_9_102 118492 119316 + 3.A.1.1.11
TF HRGMv2_2270_9 HRGMv2_2270_9_103 119335 120552 + MarR
CAZyme HRGMv2_2270_9 HRGMv2_2270_9_104 120587 121621 + GH177
Gene ID: HRGMv2_2270_9_96
Type: CAZyme
Location: 111297 - 112334 (+)
Gene ID: HRGMv2_2270_9_97
Type: pfam
Location: 112719 - 114005 (+)
Gene ID: HRGMv2_2270_9_98
Type: CAZyme
Location: 113992 - 115059 (+)
Gene ID: HRGMv2_2270_9_99
Type: pfam
Location: 115074 - 115925 (+)
Gene ID: HRGMv2_2270_9_100
Type: TC
Location: 115957 - 117369 (+)
Gene ID: HRGMv2_2270_9_101
Type: TC
Location: 117386 - 118318 (+)
Gene ID: HRGMv2_2270_9_102
Type: TC
Location: 118492 - 119316 (+)
Gene ID: HRGMv2_2270_9_103
Type: TF
Location: 119335 - 120552 (+)
Gene ID: HRGMv2_2270_9_104
Type: CAZyme
Location: 120587 - 121621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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