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Cluster: HRGMv2_2270_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_9 HRGMv2_2270_9_81 94692 95156 + 4.A.6.2.2
TC HRGMv2_2270_9 HRGMv2_2270_9_82 95172 95642 + 4.A.6.1.2
TC HRGMv2_2270_9 HRGMv2_2270_9_83 95657 96430 + 4.A.6.1.16
TC HRGMv2_2270_9 HRGMv2_2270_9_84 96427 97254 + 4.A.6.1.1
pfam HRGMv2_2270_9 HRGMv2_2270_9_85 97269 98159 + SIS_2 | GKRP_SIS_N
CAZyme HRGMv2_2270_9 HRGMv2_2270_9_86 98371 100092 + GH3
pfam HRGMv2_2270_9 HRGMv2_2270_9_87 100123 102021 + DUF4838
TC HRGMv2_2270_9 HRGMv2_2270_9_88 102212 103165 + 3.A.1.1.4
TC HRGMv2_2270_9 HRGMv2_2270_9_89 103190 104032 + 3.A.1.1.18
pfam HRGMv2_2270_9 HRGMv2_2270_9_90 104060 104938 + AP_endonuc_2
CAZyme HRGMv2_2270_9 HRGMv2_2270_9_91 104952 106052 + GH179
Gene ID: HRGMv2_2270_9_81
Type: TC
Location: 94692 - 95156 (+)
Gene ID: HRGMv2_2270_9_82
Type: TC
Location: 95172 - 95642 (+)
Gene ID: HRGMv2_2270_9_83
Type: TC
Location: 95657 - 96430 (+)
Gene ID: HRGMv2_2270_9_84
Type: TC
Location: 96427 - 97254 (+)
Gene ID: HRGMv2_2270_9_85
Type: pfam
Location: 97269 - 98159 (+)
Gene ID: HRGMv2_2270_9_86
Type: CAZyme
Location: 98371 - 100092 (+)
Gene ID: HRGMv2_2270_9_87
Type: pfam
Location: 100123 - 102021 (+)
Gene ID: HRGMv2_2270_9_88
Type: TC
Location: 102212 - 103165 (+)
Gene ID: HRGMv2_2270_9_89
Type: TC
Location: 103190 - 104032 (+)
Gene ID: HRGMv2_2270_9_90
Type: pfam
Location: 104060 - 104938 (+)
Gene ID: HRGMv2_2270_9_91
Type: CAZyme
Location: 104952 - 106052 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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