Cluster: HRGMv2_2270_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_9 | HRGMv2_2270_9_39 | 42741 | 44618 | + | 3.A.16.1.2 |
| TF | HRGMv2_2270_9 | HRGMv2_2270_9_40 | 44735 | 45706 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2270_9 | HRGMv2_2270_9_41 | 45893 | 48070 | + | GH112 |
| TC | HRGMv2_2270_9 | HRGMv2_2270_9_42 | 48165 | 49499 | + | 2.A.66.1.33 |
| pfam | HRGMv2_2270_9 | HRGMv2_2270_9_43 | 49554 | 49964 | - | SnoaL | SnoaL_2 |
| CAZyme | HRGMv2_2270_9 | HRGMv2_2270_9_44 | 50924 | 55525 | - | PL8 |
Gene ID: HRGMv2_2270_9_39
Type: TC
Location: 42741 - 44618 (+)
Type: TC
Location: 42741 - 44618 (+)
Gene ID: HRGMv2_2270_9_40
Type: TF
Location: 44735 - 45706 (-)
Type: TF
Location: 44735 - 45706 (-)
Gene ID: HRGMv2_2270_9_41
Type: CAZyme
Location: 45893 - 48070 (+)
Type: CAZyme
Location: 45893 - 48070 (+)
Gene ID: HRGMv2_2270_9_42
Type: TC
Location: 48165 - 49499 (+)
Type: TC
Location: 48165 - 49499 (+)
Gene ID: HRGMv2_2270_9_43
Type: pfam
Location: 49554 - 49964 (-)
Type: pfam
Location: 49554 - 49964 (-)
Gene ID: HRGMv2_2270_9_44
Type: CAZyme
Location: 50924 - 55525 (-)
Type: CAZyme
Location: 50924 - 55525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.