Cluster: HRGMv2_2270_CGC34
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_8 | HRGMv2_2270_8_65 | 73191 | 76361 | - | GT2 |
| pfam | HRGMv2_2270_8 | HRGMv2_2270_8_66 | 76348 | 77130 | - | PCMT | Methyltransf_11 | Methyltransf_25 |
| TC | HRGMv2_2270_8 | HRGMv2_2270_8_67 | 77132 | 78472 | - | 3.A.1.103.6 |
| TC | HRGMv2_2270_8 | HRGMv2_2270_8_68 | 78500 | 79309 | - | 3.A.1.104.1 |
| pfam | HRGMv2_2270_8 | HRGMv2_2270_8_69 | 79327 | 79881 | - | dTDP_sugar_isom |
| NULL(UNKNOWN) | HRGMv2_2270_8 | HRGMv2_2270_8_70 | 80104 | 80238 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2270_8 | HRGMv2_2270_8_71 | 80723 | 81688 | - | GT2 |
| pfam | HRGMv2_2270_8 | HRGMv2_2270_8_72 | 81799 | 83451 | - | DUF2142 |
| pfam | HRGMv2_2270_8 | HRGMv2_2270_8_73 | 83432 | 83869 | - | DUF2304 |
| CAZyme | HRGMv2_2270_8 | HRGMv2_2270_8_74 | 83894 | 84583 | - | GT2 |
Gene ID: HRGMv2_2270_8_65
Type: CAZyme
Location: 73191 - 76361 (-)
Type: CAZyme
Location: 73191 - 76361 (-)
Gene ID: HRGMv2_2270_8_66
Type: pfam
Location: 76348 - 77130 (-)
Type: pfam
Location: 76348 - 77130 (-)
Gene ID: HRGMv2_2270_8_67
Type: TC
Location: 77132 - 78472 (-)
Type: TC
Location: 77132 - 78472 (-)
Gene ID: HRGMv2_2270_8_68
Type: TC
Location: 78500 - 79309 (-)
Type: TC
Location: 78500 - 79309 (-)
Gene ID: HRGMv2_2270_8_69
Type: pfam
Location: 79327 - 79881 (-)
Type: pfam
Location: 79327 - 79881 (-)
Gene ID: HRGMv2_2270_8_70
Type:
Location: 80104 - 80238 (-)
Type:
Location: 80104 - 80238 (-)
Gene ID: HRGMv2_2270_8_71
Type: CAZyme
Location: 80723 - 81688 (-)
Type: CAZyme
Location: 80723 - 81688 (-)
Gene ID: HRGMv2_2270_8_72
Type: pfam
Location: 81799 - 83451 (-)
Type: pfam
Location: 81799 - 83451 (-)
Gene ID: HRGMv2_2270_8_73
Type: pfam
Location: 83432 - 83869 (-)
Type: pfam
Location: 83432 - 83869 (-)
Gene ID: HRGMv2_2270_8_74
Type: CAZyme
Location: 83894 - 84583 (-)
Type: CAZyme
Location: 83894 - 84583 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.