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Cluster: HRGMv2_2270_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_7 HRGMv2_2270_7_54 58840 60240 - 2.A.35.1.2
TC HRGMv2_2270_7 HRGMv2_2270_7_55 60399 62894 - 2.A.16.2.2
NULL(UNKNOWN) HRGMv2_2270_7 HRGMv2_2270_7_56 62891 63172 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2270_7 HRGMv2_2270_7_57 63671 65659 - PL12_1
TC HRGMv2_2270_7 HRGMv2_2270_7_58 65673 66512 - 3.A.1.1.11
TC HRGMv2_2270_7 HRGMv2_2270_7_59 66527 67450 - 3.A.1.1.20
STP HRGMv2_2270_7 HRGMv2_2270_7_60 67463 68821 - SBP_bac_1
CAZyme HRGMv2_2270_7 HRGMv2_2270_7_61 68839 70002 - GH88
Gene ID: HRGMv2_2270_7_54
Type: TC
Location: 58840 - 60240 (-)
Gene ID: HRGMv2_2270_7_55
Type: TC
Location: 60399 - 62894 (-)
Gene ID: HRGMv2_2270_7_56
Type:
Location: 62891 - 63172 (-)
Gene ID: HRGMv2_2270_7_57
Type: CAZyme
Location: 63671 - 65659 (-)
Gene ID: HRGMv2_2270_7_58
Type: TC
Location: 65673 - 66512 (-)
Gene ID: HRGMv2_2270_7_59
Type: TC
Location: 66527 - 67450 (-)
Gene ID: HRGMv2_2270_7_60
Type: STP
Location: 67463 - 68821 (-)
Gene ID: HRGMv2_2270_7_61
Type: CAZyme
Location: 68839 - 70002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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