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Cluster: HRGMv2_2270_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_6 HRGMv2_2270_6_93 108804 109748 + 3.A.1.1.10
TC HRGMv2_2270_6 HRGMv2_2270_6_94 109799 110728 + 3.A.1.1.29
STP HRGMv2_2270_6 HRGMv2_2270_6_95 110809 112335 + SBP_bac_1
TC HRGMv2_2270_6 HRGMv2_2270_6_96 112488 114248 + 9.B.33.1.1
TF HRGMv2_2270_6 HRGMv2_2270_6_97 114254 115021 + HTH_AraC
CAZyme HRGMv2_2270_6 HRGMv2_2270_6_98 115025 118189 + GH38
sulfatase HRGMv2_2270_6 HRGMv2_2270_6_99 118193 119674 + S1_61
CAZyme HRGMv2_2270_6 HRGMv2_2270_6_100 119688 121598 + GH20
pfam HRGMv2_2270_6 HRGMv2_2270_6_101 121600 122496 + ROK
CAZyme HRGMv2_2270_6 HRGMv2_2270_6_102 122522 123922 + GH1
Gene ID: HRGMv2_2270_6_93
Type: TC
Location: 108804 - 109748 (+)
Gene ID: HRGMv2_2270_6_94
Type: TC
Location: 109799 - 110728 (+)
Gene ID: HRGMv2_2270_6_95
Type: STP
Location: 110809 - 112335 (+)
Gene ID: HRGMv2_2270_6_96
Type: TC
Location: 112488 - 114248 (+)
Gene ID: HRGMv2_2270_6_97
Type: TF
Location: 114254 - 115021 (+)
Gene ID: HRGMv2_2270_6_98
Type: CAZyme
Location: 115025 - 118189 (+)
Gene ID: HRGMv2_2270_6_99
Type: sulfatase
Location: 118193 - 119674 (+)
Gene ID: HRGMv2_2270_6_100
Type: CAZyme
Location: 119688 - 121598 (+)
Gene ID: HRGMv2_2270_6_101
Type: pfam
Location: 121600 - 122496 (+)
Gene ID: HRGMv2_2270_6_102
Type: CAZyme
Location: 122522 - 123922 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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