Cluster: HRGMv2_2270_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_00345
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_1 | HRGMv2_2270_1_39 | 44441 | 45955 | - | CBM91 | GH43_10 |
| pfam | HRGMv2_2270_1 | HRGMv2_2270_1_40 | 45985 | 47010 | - | Lipase_GDSL_2 | Lipase_GDSL_3 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_41 | 47020 | 47859 | - | 3.A.1.1.11 |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_42 | 47872 | 48783 | - | 3.A.1.1.11 |
| STP | HRGMv2_2270_1 | HRGMv2_2270_1_43 | 48874 | 50247 | - | SBP_bac_1 |
| TF | HRGMv2_2270_1 | HRGMv2_2270_1_44 | 50540 | 51301 | + | HTH_AraC |
| TC | HRGMv2_2270_1 | HRGMv2_2270_1_45 | 51298 | 53046 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_2270_1_39
Type: CAZyme
Location: 44441 - 45955 (-)
Type: CAZyme
Location: 44441 - 45955 (-)
Gene ID: HRGMv2_2270_1_40
Type: pfam
Location: 45985 - 47010 (-)
Type: pfam
Location: 45985 - 47010 (-)
Gene ID: HRGMv2_2270_1_41
Type: TC
Location: 47020 - 47859 (-)
Type: TC
Location: 47020 - 47859 (-)
Gene ID: HRGMv2_2270_1_42
Type: TC
Location: 47872 - 48783 (-)
Type: TC
Location: 47872 - 48783 (-)
Gene ID: HRGMv2_2270_1_43
Type: STP
Location: 48874 - 50247 (-)
Type: STP
Location: 48874 - 50247 (-)
Gene ID: HRGMv2_2270_1_44
Type: TF
Location: 50540 - 51301 (+)
Type: TF
Location: 50540 - 51301 (+)
Gene ID: HRGMv2_2270_1_45
Type: TC
Location: 51298 - 53046 (+)
Type: TC
Location: 51298 - 53046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.