Cluster: HRGMv2_2270_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_01219
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_6 | HRGMv2_2270_6_55 | 64718 | 66028 | + | 3.A.1.1.26 |
| TC | HRGMv2_2270_6 | HRGMv2_2270_6_56 | 66101 | 67012 | + | 3.A.1.1.11 |
| TC | HRGMv2_2270_6 | HRGMv2_2270_6_57 | 67030 | 67854 | + | 3.A.1.1.36 |
| pfam | HRGMv2_2270_6 | HRGMv2_2270_6_58 | 67891 | 68496 | + | DUF624 |
| CAZyme | HRGMv2_2270_6 | HRGMv2_2270_6_59 | 68517 | 70709 | + | GH36 |
Gene ID: HRGMv2_2270_6_55
Type: TC
Location: 64718 - 66028 (+)
Type: TC
Location: 64718 - 66028 (+)
Gene ID: HRGMv2_2270_6_56
Type: TC
Location: 66101 - 67012 (+)
Type: TC
Location: 66101 - 67012 (+)
Gene ID: HRGMv2_2270_6_57
Type: TC
Location: 67030 - 67854 (+)
Type: TC
Location: 67030 - 67854 (+)
Gene ID: HRGMv2_2270_6_58
Type: pfam
Location: 67891 - 68496 (+)
Type: pfam
Location: 67891 - 68496 (+)
Gene ID: HRGMv2_2270_6_59
Type: CAZyme
Location: 68517 - 70709 (+)
Type: CAZyme
Location: 68517 - 70709 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.