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Cluster: HRGMv2_2270_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_5 HRGMv2_2270_5_103 113410 115752 + GH65
STP HRGMv2_2270_5 HRGMv2_2270_5_104 115933 117255 + SBP_bac_1
TC HRGMv2_2270_5 HRGMv2_2270_5_105 117287 118198 + 3.A.1.1.4
TC HRGMv2_2270_5 HRGMv2_2270_5_106 118211 119041 + 3.A.1.1.39
pfam HRGMv2_2270_5 HRGMv2_2270_5_107 119028 119690 + Hydrolase | HAD_2
CAZyme HRGMv2_2270_5 HRGMv2_2270_5_108 119771 121489 + GH13_31
TC HRGMv2_2270_5 HRGMv2_2270_5_109 121639 123015 + 9.B.10.1.1
Gene ID: HRGMv2_2270_5_103
Type: CAZyme
Location: 113410 - 115752 (+)
Gene ID: HRGMv2_2270_5_104
Type: STP
Location: 115933 - 117255 (+)
Gene ID: HRGMv2_2270_5_105
Type: TC
Location: 117287 - 118198 (+)
Gene ID: HRGMv2_2270_5_106
Type: TC
Location: 118211 - 119041 (+)
Gene ID: HRGMv2_2270_5_107
Type: pfam
Location: 119028 - 119690 (+)
Gene ID: HRGMv2_2270_5_108
Type: CAZyme
Location: 119771 - 121489 (+)
Gene ID: HRGMv2_2270_5_109
Type: TC
Location: 121639 - 123015 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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