Cluster: HRGMv2_2270_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_02530
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_4 | HRGMv2_2270_4_159 | 167898 | 169031 | - | GH88 |
| CAZyme | HRGMv2_2270_4 | HRGMv2_2270_4_160 | 169015 | 170754 | - | GH154 |
| STP | HRGMv2_2270_4 | HRGMv2_2270_4_161 | 170934 | 172319 | - | SBP_bac_1 |
| TC | HRGMv2_2270_4 | HRGMv2_2270_4_162 | 172491 | 173330 | - | 3.A.1.1.11 |
| TC | HRGMv2_2270_4 | HRGMv2_2270_4_163 | 173330 | 174259 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2270_4_159
Type: CAZyme
Location: 167898 - 169031 (-)
Type: CAZyme
Location: 167898 - 169031 (-)
Gene ID: HRGMv2_2270_4_160
Type: CAZyme
Location: 169015 - 170754 (-)
Type: CAZyme
Location: 169015 - 170754 (-)
Gene ID: HRGMv2_2270_4_161
Type: STP
Location: 170934 - 172319 (-)
Type: STP
Location: 170934 - 172319 (-)
Gene ID: HRGMv2_2270_4_162
Type: TC
Location: 172491 - 173330 (-)
Type: TC
Location: 172491 - 173330 (-)
Gene ID: HRGMv2_2270_4_163
Type: TC
Location: 173330 - 174259 (-)
Type: TC
Location: 173330 - 174259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.