dbCAN Logo

Cluster: HRGMv2_2270_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_4 HRGMv2_2270_4_139 141399 142763 - 2.A.22.5.3
NULL(UNKNOWN) HRGMv2_2270_4 HRGMv2_2270_4_140 142911 143837 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2270_4 HRGMv2_2270_4_141 143885 143998 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2270_4 HRGMv2_2270_4_142 144194 146317 - GH105
CAZyme HRGMv2_2270_4 HRGMv2_2270_4_143 146339 148075 - GH2
TC HRGMv2_2270_4 HRGMv2_2270_4_144 148137 149009 - 3.A.1.1.11
TC HRGMv2_2270_4 HRGMv2_2270_4_145 149009 149920 - 3.A.1.1.11
TC HRGMv2_2270_4 HRGMv2_2270_4_146 149965 151335 - 3.A.1.1.11
TC HRGMv2_2270_4 HRGMv2_2270_4_147 151546 153324 + 9.B.33.1.1
TF HRGMv2_2270_4 HRGMv2_2270_4_148 153338 154354 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2270_4 HRGMv2_2270_4_149 154470 157052 - GH3
Gene ID: HRGMv2_2270_4_139
Type: TC
Location: 141399 - 142763 (-)
Gene ID: HRGMv2_2270_4_140
Type:
Location: 142911 - 143837 (-)
Gene ID: HRGMv2_2270_4_141
Type:
Location: 143885 - 143998 (-)
Gene ID: HRGMv2_2270_4_142
Type: CAZyme
Location: 144194 - 146317 (-)
Gene ID: HRGMv2_2270_4_143
Type: CAZyme
Location: 146339 - 148075 (-)
Gene ID: HRGMv2_2270_4_144
Type: TC
Location: 148137 - 149009 (-)
Gene ID: HRGMv2_2270_4_145
Type: TC
Location: 149009 - 149920 (-)
Gene ID: HRGMv2_2270_4_146
Type: TC
Location: 149965 - 151335 (-)
Gene ID: HRGMv2_2270_4_147
Type: TC
Location: 151546 - 153324 (+)
Gene ID: HRGMv2_2270_4_148
Type: TF
Location: 153338 - 154354 (+)
Gene ID: HRGMv2_2270_4_149
Type: CAZyme
Location: 154470 - 157052 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List