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Cluster: HRGMv2_2270_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_4 HRGMv2_2270_4_112 113183 115291 - GH73
TC HRGMv2_2270_4 HRGMv2_2270_4_113 115507 116919 - 3.B.1.1.6
TC HRGMv2_2270_4 HRGMv2_2270_4_114 116944 118089 - 3.B.1.1.3
TC HRGMv2_2270_4 HRGMv2_2270_4_115 118138 118515 - 3.B.1.1.2
pfam HRGMv2_2270_4 HRGMv2_2270_4_116 118536 119309 - OAD_gamma
TC HRGMv2_2270_4 HRGMv2_2270_4_117 119327 120781 - 3.B.1.1.5
NULL(UNKNOWN) HRGMv2_2270_4 HRGMv2_2270_4_118 121054 121650 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2270_4 HRGMv2_2270_4_119 121763 122629 - 2.A.115.1.5
TC HRGMv2_2270_4 HRGMv2_2270_4_120 122785 124416 + 2.A.36.6.11
Gene ID: HRGMv2_2270_4_112
Type: CAZyme
Location: 113183 - 115291 (-)
Gene ID: HRGMv2_2270_4_113
Type: TC
Location: 115507 - 116919 (-)
Gene ID: HRGMv2_2270_4_114
Type: TC
Location: 116944 - 118089 (-)
Gene ID: HRGMv2_2270_4_115
Type: TC
Location: 118138 - 118515 (-)
Gene ID: HRGMv2_2270_4_116
Type: pfam
Location: 118536 - 119309 (-)
Gene ID: HRGMv2_2270_4_117
Type: TC
Location: 119327 - 120781 (-)
Gene ID: HRGMv2_2270_4_118
Type:
Location: 121054 - 121650 (-)
Gene ID: HRGMv2_2270_4_119
Type: TC
Location: 121763 - 122629 (-)
Gene ID: HRGMv2_2270_4_120
Type: TC
Location: 122785 - 124416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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