Cluster: HRGMv2_2270_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_136 | 169238 | 170575 | + | 1.I.1.1.3 |
| CAZyme | HRGMv2_2270_3 | HRGMv2_2270_3_137 | 170672 | 178501 | - | GH30_5 | GH43_24 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_138 | 178725 | 179615 | - | 2.A.7.3.49 |
| peptidase | HRGMv2_2270_3 | HRGMv2_2270_3_139 | 179715 | 180875 | + | M20.UPW |
| STP | HRGMv2_2270_3 | HRGMv2_2270_3_140 | 180972 | 183440 | - | GGDEF | SBP_bac_3 | SBP_bac_3 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_141 | 183651 | 184361 | - | 1.A.14.2.2 |
Gene ID: HRGMv2_2270_3_136
Type: TC
Location: 169238 - 170575 (+)
Type: TC
Location: 169238 - 170575 (+)
Gene ID: HRGMv2_2270_3_137
Type: CAZyme
Location: 170672 - 178501 (-)
Type: CAZyme
Location: 170672 - 178501 (-)
Gene ID: HRGMv2_2270_3_138
Type: TC
Location: 178725 - 179615 (-)
Type: TC
Location: 178725 - 179615 (-)
Gene ID: HRGMv2_2270_3_139
Type: peptidase
Location: 179715 - 180875 (+)
Type: peptidase
Location: 179715 - 180875 (+)
Gene ID: HRGMv2_2270_3_140
Type: STP
Location: 180972 - 183440 (-)
Type: STP
Location: 180972 - 183440 (-)
Gene ID: HRGMv2_2270_3_141
Type: TC
Location: 183651 - 184361 (-)
Type: TC
Location: 183651 - 184361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.