Cluster: HRGMv2_2270_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_00675
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_3 | HRGMv2_2270_3_40 | 62897 | 64042 | - | GH88 |
| CAZyme | HRGMv2_2270_3 | HRGMv2_2270_3_41 | 64074 | 65786 | - | GH3 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_42 | 65803 | 66648 | - | 3.A.1.1.36 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_43 | 66661 | 67557 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2270_3_40
Type: CAZyme
Location: 62897 - 64042 (-)
Type: CAZyme
Location: 62897 - 64042 (-)
Gene ID: HRGMv2_2270_3_41
Type: CAZyme
Location: 64074 - 65786 (-)
Type: CAZyme
Location: 64074 - 65786 (-)
Gene ID: HRGMv2_2270_3_42
Type: TC
Location: 65803 - 66648 (-)
Type: TC
Location: 65803 - 66648 (-)
Gene ID: HRGMv2_2270_3_43
Type: TC
Location: 66661 - 67557 (-)
Type: TC
Location: 66661 - 67557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.