Cluster: HRGMv2_2270_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_00259
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_3 | HRGMv2_2270_3_15 | 21009 | 22166 | - | GH88 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_16 | 22183 | 23076 | - | 3.A.1.1.10 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_17 | 23088 | 24038 | - | 3.A.1.1.10 |
| TC | HRGMv2_2270_3 | HRGMv2_2270_3_18 | 24062 | 25777 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_2270_3 | HRGMv2_2270_3_19 | 25774 | 27852 | - | PL12 |
Gene ID: HRGMv2_2270_3_15
Type: CAZyme
Location: 21009 - 22166 (-)
Type: CAZyme
Location: 21009 - 22166 (-)
Gene ID: HRGMv2_2270_3_16
Type: TC
Location: 22183 - 23076 (-)
Type: TC
Location: 22183 - 23076 (-)
Gene ID: HRGMv2_2270_3_17
Type: TC
Location: 23088 - 24038 (-)
Type: TC
Location: 23088 - 24038 (-)
Gene ID: HRGMv2_2270_3_18
Type: TC
Location: 24062 - 25777 (-)
Type: TC
Location: 24062 - 25777 (-)
Gene ID: HRGMv2_2270_3_19
Type: CAZyme
Location: 25774 - 27852 (-)
Type: CAZyme
Location: 25774 - 27852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.